BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014G02LP1|AL426726
(797 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig948 1553 0.0
>3x_Contig948
Length = 3578
Score = 1553 bits (783), Expect = 0.0
Identities = 794/797 (99%), Gaps = 1/797 (0%)
Strand = Plus / Plus
Query: 1 agggcatcgttcttctcaaaaaaggtttaaaagaggtactgtaacggaagagaagctagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2579 agggcatcgttcttctcaaaaaaggtttaaaagaggtactgtaacggaagagaagctagt 2638
Query: 61 atcaccaacattcgactggaacgaatctttggagcaagttaaattcgcttcctcagcaat 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2639 atcaccaacattcgactggaacgaatctttggagcaagtgaaattcgcttcctcagcaat 2698
Query: 121 aactggtactcctcaattggccagaccactggtcacaactggattgaggaaacatgtaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2699 aactggtactcctcaattggccagaccactggtcacaactggattgaggaaacatgtaaa 2758
Query: 181 agaggacagtgtagaactcgatggttcaattgagaaagacacaaattcgttgtcagtatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2759 agaggacagtgtagaactcgatggttcaattgagaaagacacaaattcgttgtcagtatc 2818
Query: 241 cgggaaactatcggatgcagaactctctgaggataaatcagttattgacggtaacacaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2819 cgggaaactatcggatgcagaactctctgaggataaatcagttattgacggtaacacaac 2878
Query: 301 catatgtggtgctgcaagcctgaaggcaagtagattcgaaccacctcaattcgtagctga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2879 catatgtggtgctgcaagcctgaaggcaagtagattcgaaccacctcaattcgtagctga 2938
Query: 361 atcttctcaattgtcagatatggtaaagaaacccattgaggagcccgattctttctacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2939 atcttctcaattgtcagatatggtaaagaaacccattgaggagcccgattctttctacac 2998
Query: 421 agcgccagaaaccactgattcagatgatgatttagaaaccgaagatatctttcaagaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2999 agcgccagaaaccactgattcagatgatgatttagaaaccgaagatatctttcaagaaat 3058
Query: 481 atcaagccatgcaaacaaaacctggaactcaactaaaaaccagataccgaaacggtacca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 atcaagccatgcaaacaaaacctggaactcaactaaaaaccagataccgaaacggtacca 3118
Query: 541 tggcataatcagcggaatgcttgattccatcaatgaatttacggtctctaagctaataga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 tggcataatcagcggaatgcttgattccatcaatgaatttacggtctctaagctaataga 3178
Query: 601 agaaaaccagcaatggtcaaatcttttctcggaaagagatcaattgatccataccttatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 agaaaaccagcaatggtcaaatcttttctcggaaagagatcaattgatccataccttatc 3238
Query: 661 ttcaaaactgatagagaaagaaaaactcgtagccacctaccagggaaaattgcaacaaat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 ttcaaaactgatagagaaagaaaaactcgtagccacctaccagggaaaattgcaacaaat 3298
Query: 721 acacgcagaatcctcaacagagaaattgccacaatgacgcgtgtkctaacactaatatac 780
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 3299 acacgcagaatcctcaacagagaaattgccacaatgacgcgtgtgctaacact-atatac 3357
Query: 781 actctagctattacaat 797
|||||||||||||||||
Sbjct: 3358 actctagctattacaat 3374
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6381
Number of Sequences: 1807
Number of extensions: 6381
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 797
length of database: 10,358,551
effective HSP length: 16
effective length of query: 781
effective length of database: 10,329,639
effective search space: 8067448059
effective search space used: 8067448059
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)